BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C12LP1|AL426346
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1337 0.0
>3x_Contig1313
Length = 8010
Score = 1337 bits (674), Expect = 0.0
Identities = 688/692 (99%), Gaps = 1/692 (0%)
Strand = Plus / Minus
Query: 1 atccgatgctaaatttttagcgccaaatcagaatagtagatgcgttagtwatacctaacc 60
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 692 atccgatgctaaatttttagcgccaaa-cagaatagtagatgcgttagtaatacctaacc 634
Query: 61 agaagtgttctgataaaaatgatacgtgcattctatgccttgcctctggagagatatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agaagtgttctgataaaaatgatacgtgcattctatgccttgcctctggagagatatact 574
Query: 121 ccatggatttccactaccaccagacagctgaaaagtatgatatcgagttggtatgttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ccatggatttccactaccaccagacagctgaaaagtatgatatcgagttggtatgttcat 514
Query: 181 ataaacttgataacgtacccccaaagtttactgctaaactcacttactccagtaccaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ataaacttgataacgtacccccaaagtttactgctaaactcacttactccagtaccaatg 454
Query: 241 atcttataggatttgtaacgtcaatgcatctcatgtgcgttttatcattgcataagcgcg 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 453 atcttataggatttgtaacgtcaatgcatctcatgtgcgtgttatcattgcataagcgcg 394
Query: 301 agagggcttttttcaagttagacttcaacgttctgttacaactaggttgcgatattgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agagggcttttttcaagttagacttcaacgttctgttacaactaggttgcgatattgaca 334
Query: 361 ctataacatggcaatccgggaaattactttacattgattacttcaaaaagaaccatgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ctataacatggcaatccgggaaattactttacattgattacttcaaaaagaaccatgtaa 274
Query: 421 gggtagtagagcaagatgtgcaggggtatgggttttttgagtgttactttattatcaatg 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 273 gggtagtagagcaagatgtgcaggggtatgggttttttgagtgtaactttattatcaatg 214
Query: 481 atgtgaaagatgaagataaaatactattactagatagagacaacgttttactcgtcgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atgtgaaagatgaagataaaatactattactagatagagacaacgttttactcgtcgaag 154
Query: 541 gttcaatgaaaaaagctaatatagtttcggcagggacagagaaaattgacgttggttctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gttcaatgaaaaaagctaatatagtttcggcagggacagagaaaattgacgttggttctt 94
Query: 601 tagatctcgtgtttgcttcttcagctgacattatcgattatagcctgtttaaggtgatcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tagatctcgtgtttgcttcttcagctgacattatcgattatagcctgtttaaggtgatcg 34
Query: 661 aggagccttttaaaagtgtcaatttcttaatc 692
||||||||||||||||||||||||||||||||
Sbjct: 33 aggagccttttaaaagtgtcaatttcttaatc 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5621
Number of Sequences: 1807
Number of extensions: 5621
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)